PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010935558.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family TCP
Protein Properties Length: 266aa    MW: 27074.2 Da    PI: 10.5887
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010935558.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1264.1e-39331352105
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg.kaaksaa 95 
                     a+kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+ +i+++tgt++++as++++++s+s+a +s s+ +  +s+ 
  XP_010935558.1  33 AVKKPPAKDRHSKVDGRGRRIRMPIVCAARVFQLTRELGHKSDGQTIEWLLRQAESSIIAATGTGTIPASFSSSSTSRSAATHSLSSpS--SSSS 125
                     789******************************************************************88854455444443333322..2222 PP

             TCP  96 kskksqksaa 105
                     +   ++k+++
  XP_010935558.1 126 SAAADHKNPH 135
                     2222222222 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136927.3193993IPR017887Transcription factor TCP subgroup
PfamPF036341.3E-3439132IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MTTPDRVTNG GQASGGAAQQ QVMAAGANGT ALAVKKPPAK DRHSKVDGRG RRIRMPIVCA  60
ARVFQLTREL GHKSDGQTIE WLLRQAESSI IAATGTGTIP ASFSSSSTSR SAATHSLSSP  120
SSSSSSAAAD HKNPHHLLPP AVPHPFILGK RLRSDDDSSA DKDDSAAAAA GGASGHLIGP  180
AGGFWAVPAR PDFGQLWSFA APEIVMPPAA AAITGRFAAA QPVGEASAAR VGNYLPIAQG  240
HLNLLASLSG APTTAAAAGR REDESR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010935558.10.0PREDICTED: transcription factor TCP7-like
SwissprotQ9FMX21e-78TCP7_ARATH; Transcription factor TCP7
TrEMBLG3BGV46e-92G3BGV4_SOLLC; TCP transcription factor 14
TrEMBLK4BP746e-92K4BP74_SOLLC; Uncharacterized protein
STRINGSolyc04g009180.1.12e-91(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP194133100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23280.11e-56TCP family protein